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- Empty graph
- Empty hypergraph
- Empty loop
- Empty marking problem
- Empty string
- Empty subgraph
- Empty symbol
- Empty tree
- Enabled transition
- Enclosure transition
- End-edge
- Endblock
- Endline graph
- Endomorphism
- Endpoint, end-vertex
- Endpoints of a path (chain)
- Energy of graph
- Entire choice number
- Entire chromatic number
- Entire colouring
- Entry node of a fragment
- Entry vertex
- Entry vertex of a subgraph
- Environment of a vertex
- Equally coloured vertices
- Equiseparable trees
- Equistable graph
- Equitable partition
- Equivalence of languages problem
- Equivalence relation
- Equivalent cycles
- Equivalent derivations
- Equivalent grammars
- Equivalent program schemata
- Equivalent programs
- Erdos--Gallai criterion
- Essential arc
- Essential independent set
- Euler graph
- Eulerian chain
- Eulerian circuit
- Eulerian cycle
- Eulerian digraph
- Eulerian graph
- Eulerian tour
- Eulerian trail
- Evaluated graph
- Evaluation of a graph
- Even component
- Even contractile graph