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- Set of priorities
- Set of reachable markings
- Shell
- Shortest-path distance
- Shortest Steiner's tree
- Shortest path
- Shortest spanning tree
- Shredder
- Sierpinski graph
- Sign of a graph
- Signed dominating function
- Signed domination number
- Signed labeled graph
- Signed total domination
- Signed total domination function
- Signed total domination number
- Sigraph
- Similar edges
- Simple chain
- Simple circuit
- Simple clique polynomial
- Simple cutset
- Simple cycle
- Simple edge
- Simple eigenvalue
- Simple elimination ordering
- Simple graph
- Simple hierarchical graph
- Simple hypergraph
- Simple loop
- Simple path
- Simple rotation
- Simple transition
- Simple vertex
- Simplicial clique
- Simplicial vertex
- Simply related paths
- Simply sequential numbering
- Single-entry zone
- Singular edge exchange
- Singularly related graphs
- Sink
- Sink-tree
- Size of a directed hypergraph
- Size of a graph
- Skein
- Skeleton graph
- Skewed tree
- Skewness of a graph
- Skirting cycle